Doç.Dr. ÖMER AYDIN

Yayın Ağı

SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

Staphylococcus Aureus-Related antibiotic resistance detection using synergy of Surface-Enhanced Raman spectroscopy and deep learning

Al-Shaebi Z., UYSAL ÇİLOĞLU F., Nasser M., Kahraman M., AYDIN Ö.

Biomedical Signal Processing and Control , cilt.91, 2024 (SCI-Expanded)

Breakthrough Solution for Antimicrobial Resistance Detection: Surface-Enhanced Raman Spectroscopy-based on Artificial Intelligence

Al-Shaebi Z., Akdeniz M., Ahmed A. O., Altunbek M., AYDIN Ö.

ADVANCED MATERIALS INTERFACES , 2023 (SCI-Expanded)

Characterization and discrimination of spike protein in SARS‐CoV‐2 virus‐like particles via surface‐enhanced raman spectroscopy

Akdeniz M., Al-Shaebi Z., Altunbek M., Bayraktar C., Kayabolen A., Bagci-Onder T., et al.

BIOTECHNOLOGY JOURNAL , cilt.2300191, ss.1-10, 2023 (SCI-Expanded)

Design, synthesis, molecular docking and biological evaluation of 1,2,4-triazole derivatives possessing a hydrazone moiety as anti-breast cancer agents

Tapera M., Kekeçmuhammed H., Tunc C. U., Kutlu A. U., ÇELİK İ., Zorlu Y., et al.

New Journal of Chemistry , cilt.47, sa.24, ss.11602-11614, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma

Overcome of Cisplatin Drug Resistance in Ovarian Cancer by Combination of Low-Intensity Ultrasound and Cisplatin.

Kip B., Aydin Ö.

Current drug delivery , cilt.20, ss.1380-1390, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma

Simple Staining of Cells on a Chip.

Kosker F. B., Aydin Ö., Icoz K.

Biosensors , cilt.12, sa.11, 2022 (SCI-Expanded)

DeepCAN: A Modular Deep Learning System for Automated Cell Counting and Viability Analysis.

Eren F., Aslan M., Kanarya D., Uysalli Y., Aydin M., Kiraz B., et al.

IEEE journal of biomedical and health informatics , cilt.26, sa.11, ss.5575-5583, 2022 (SCI-Expanded)

Highly Accurate Identification of Bacteria's Antibiotic Resistance Based on Raman Spectroscopy and U-Net Deep Learning Algorithms

Al-Shaebi Z., UYSAL ÇİLOĞLU F., Nasser M., AYDIN Ö.

ACS OMEGA , cilt.7, sa.33, ss.29443-29451, 2022 (SCI-Expanded)

SERS-based sensor with a machine learning based effective feature extraction technique for fast detection of colistin-resistant Klebsiella pneumoniae

Ciloglu F., Hora M., GÜNDOĞDU A., Kahraman M., TOKMAKÇI M., AYDIN Ö.

Analytica Chimica Acta , cilt.1221, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma

Co-delivery of Bcl-2 siRNA and doxorubicin through gold nanoparticle-based delivery system for a combined cancer therapy approach

Tunç C. Ü., AYDIN Ö.

Journal of Drug Delivery Science and Technology , cilt.74, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma

Investigation of mammalian cells expressing SARS-CoV-2 proteins by surface-enhanced Raman scattering and multivariate analysis

Akdeniz M., UYSAL ÇİLOĞLU F., Tunc C. U., YILMAZ Ü., Kanarya D., ATALAY DÜNDAR P., et al.

ANALYST , cilt.147, sa.6, ss.1213-1221, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma

Design, synthesis, and in vitro and in vivo anticancer activity studies of new (S)-Naproxen thiosemicarbazide/1,2,4-triazole derivatives

Han M. İ., Tunc C. U., Atalay P., Erdogan O., Ünal G., Bozkurt M., et al.

NEW JOURNAL OF CHEMISTRY , cilt.46, sa.13, ss.6046-6059, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma

Discrimination of waterborne pathogens, Cryptosporidium parvum oocysts and bacteria using surface-enhanced Raman spectroscopy coupled with principal component analysis and hierarchical clustering

Arslan A. H., Ciloglu F., Yilmaz U., ŞİMŞEK E., AYDIN Ö.

Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy , cilt.267, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma

Triple-combination therapy assisted with ultrasound-active gold nanoparticles and ultrasound therapy against 3D cisplatin-resistant ovarian cancer model.

Kip B., Tunc C. U., Aydin Ö.

Ultrasonics sonochemistry , cilt.82, ss.105903, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma

Drug-resistant Staphylococcus aureus bacteria detection by combining surface-enhanced Raman spectroscopy (SERS) and deep learning techniques

Ciloglu F., Caliskan A., Saridag A. M., Kilic I. H., TOKMAKÇI M., Kahraman M., et al.

Scientific Reports , cilt.11, sa.1, 2021 (SCI-Expanded)

Design and synthesis of novel (S)-Naproxen hydrazide-hydrazones as potent VEGFR-2 inhibitors and their evaluation in vitro/in vivo breast cancer models

Han M. İ., Atalay P., Tunç C. Ü., Ünal G., Dayan S., Aydın Ö., et al.

BIOORGANIC & MEDICINAL CHEMISTRY , cilt.37, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma

Pulsed-focused ultrasound slows B16 melanoma and 4T1 breast tumor growth through differential tumor microenvironmental changes

Cohen G., Chandran P., Lorsung R. M., Aydin Ö., Tomlinson L. E., Rosenblatt R. B., et al.

Cancers , cilt.13, sa.7, 2021 (SCI-Expanded)

Identification of methicillin-resistant: Staphylococcus aureus bacteria using surface-enhanced Raman spectroscopy and machine learning techniques

Uysal C., Saridag A., Kilic I., Tokmakci M., Kahraman M., Aydin Ö.

Analyst , cilt.145, sa.23, ss.7559-7570, 2020 (SCI-Expanded)

Identification of methicillin-resistant Staphylococcus aureus bacteria using surface-enhanced Raman spectroscopy and machine learning techniques

Uysal Çiloğlu F., Sarıdağ A. M., Kılıç İ. H., Tokmakçı M., Kahraman M., Aydın Ö.

Analyst , sa.145, ss.7559-7570, 2020 (SCI-Expanded)

Usage of natural chitosan membrane obtained from insect corneal lenses as a drug carrier and its potential for point of care tests

Ikl S., Ramanauskaite A., Bilican B. K., Mulercikas P., Cam D., ÖNSES M. S., et al.

MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS , cilt.112, 2020 (SCI-Expanded)

The Proteomic Effects of Pulsed Focused Ultrasound on Tumor Microenvironments of Murine Melanoma and Breast Cancer Models.

Aydin Ö., Chandran P., Lorsung R., Cohen G., Burks S., Frank J.

Ultrasound in medicine & biology , cilt.45, ss.3232-3245, 2019 (SCI-Expanded) Sürdürülebilir Kalkınma

Noninvasive Ablation of Prostate Cancer Spheroids Using Acoustically-Activated Nanodroplets

Aydin O., VLAİSAVLJEVİCH E., Durmaz Y. Y., XU Z., ElSayed M. E. H.

MOLECULAR PHARMACEUTICS , cilt.13, sa.12, ss.4054-4065, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma

EFFECTS OF DROPLET COMPOSITION ON NANODROPLET-MEDIATED HISTOTRIPSY

VLAİSAVLJEVİCH E., Aydin O., Durmaz Y. Y., LİN K., FOWLKES B., XU Z., et al.

ULTRASOUND IN MEDICINE AND BIOLOGY , cilt.42, sa.4, ss.931-946, 2016 (SCI-Expanded)

Formulation of Acid-Sensitive Micelles for Delivery of Cabazitaxel into Prostate Cancer Cells

Aydin O., YOUSSEF I., Durmaz Y. Y., TİRUCHİNAPALLY G., ElSayed M. E. H.

MOLECULAR PHARMACEUTICS , cilt.13, sa.4, ss.1413-1429, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma

The role of positive and negative pressure on cavitation nucleation in nanodroplet-mediated histotripsy

Vlaisavljevich E., Aydin O., Lin K., Durmaz Y. Y., Fowlkes B., ElSayed M., et al.

PHYSICS IN MEDICINE AND BIOLOGY , cilt.61, sa.2, ss.663-682, 2016 (SCI-Expanded)

EFFECTS OF ULTRASOUND FREQUENCY ON NANODROPLET-MEDIATED HISTOTRIPSY

VLAİSAVLJEVİCH E., Aydin O., Durmaz Y. Y., Lin K., Fowlkes B., Elsayed M., et al.

ULTRASOUND IN MEDICINE AND BIOLOGY , cilt.41, sa.8, ss.2135-2147, 2015 (SCI-Expanded)

Oligonucleotide-Mediated Au-Ag Core-Shell Nanoparticles

Kahraman M., Aydin O., Culha M.

PLASMONICS , cilt.4, sa.4, ss.293-301, 2009 (SCI-Expanded)

Differentiation of Healthy Brain Tissue and Tumors Using Surface-Enhanced Raman Scattering

Aydin O., Altaş M., Kahraman M., Bayrak O. F., Culha M.

APPLIED SPECTROSCOPY , cilt.63, sa.10, ss.1095-1100, 2009 (SCI-Expanded)

Interaction of gold nanoparticles with mitochondria

Karatas O. F., Sezgin E., Aydin O., Culha M.

COLLOIDS AND SURFACES B-BIOINTERFACES , cilt.71, sa.2, ss.315-318, 2009 (SCI-Expanded) Sürdürülebilir Kalkınma

Surface-Enhanced Raman Scattering of Rat Tissues

Aydin O., Kahraman M., Kilic E., Culha M.

APPLIED SPECTROSCOPY , cilt.63, sa.6, ss.662-668, 2009 (SCI-Expanded)

Size Effect of 3D Aggregates Assembled from Silver Nanoparticles on Surface-Enhanced Raman Scattering

Kahraman M., Aydin O., Culha M.

CHEMPHYSCHEM , cilt.10, sa.3, ss.537-542, 2009 (SCI-Expanded)

Diğer Dergilerde Yayınlanan Makaleler

Investigation of Gold Nanoparticle Naproxen-Derived Conjugations in Ovarian Cancer

Tunc C. U., Kursunluoglu G., Akdeniz M., Kutlu A. U., Han M. İ., Aycan M. B., et al.

ACS MATERIALS AU , cilt.3, sa.5, ss.483-491, 2023 (ESCI)

Selective Binding of pVTK Peptide- and Bisphosphonate-Functionalized Micelles to Prostate Cancer Cells, Osteoblasts, and Osteoclasts

AYDIN Ö., Tiruchinapally G., Youssef I., Ramaraju H., YÜKSEL DURMAZ Y., Kozloff K. M., et al.

Precision Nanomedicine , cilt.5, sa.1, ss.851-869, 2022 (Scopus) Sürdürülebilir Kalkınma

Review: mRNA delivery systems in vaccinations and COVID-19

Walweel N., Kutlu A. U., YILMAZ Ü., Al-Shaebi Z., Charmi J., AYDIN Ö.

Journal of Research in Pharmacy , cilt.26, sa.5, ss.1084-1101, 2022 (Scopus) Sürdürülebilir Kalkınma

Yüzeyde Zenginleştirilmiş Raman Saçılması (YZRS) ile Ovaryum Kanser İlaç Direncinin İncelenmesi

AYDIN Ö.

Erciyes Üniversitesi Fen Bilimleri Enstitüsü Fen Bilimleri Dergisi , cilt.37, sa.3, ss.404-411, 2021 (Hakemli Dergi) Sürdürülebilir Kalkınma

Engineering of pH-sensitive, cross-linked micelles for drug delivery

AYDIN Ö.

JOURNAL OF RESEARCH IN PHARMACY , cilt.25, sa.4, ss.359-370, 2021 (ESCI) Sürdürülebilir Kalkınma

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

A New and Fast Approach for Antimicrobial Resistance Detection: Combination of Artificial Intelligence and Surface-Enhanced Raman Spectra

AYDIN Ö., Al-Shaebi Z., Akdeniz M., Kursunluoglu G., Zarasız G., YERLİTAŞ S. İ., et al.

16th Mediterranean Conference on Medical and Biological Engineering and Computing, MEDICON 2023 and 5th International Conference on Medical and Biological Engineering, CMBEBIH 2023, Sarajevo, Bosna-Hersek, 14 - 16 Eylül 2023, cilt.94, ss.98-103

Development of Polymer-Based Nanoparticles for the Reduction of Melittin Toxicity

Chatzi Memet B., DEMİRPOLAT E., Yildirim T., AYDIN Ö.

EMODIN'S EFFECT ON THE SARS-COV-2 ENVELOP PROTEIN

BEKCİ H., Somtürk B., TUNÇ C. Ü., Yılmaz Ü., AYDIN Ö., AYCAN M. B.

INTERNATIONAL CAPPADOCIA SCIENTIFIC RESEARCH CONGRESS, Nevşehir, Türkiye, 15 Aralık 2021 Sürdürülebilir Kalkınma

Dopamine conjugated Polymer Nanoparticles for Active Targeting

Yılmaz Ü., Memet B. C., AYDIN Ö., Yıldırım T.

4th International Conference On Natural Products for Cancer Prevention and Therapy, Türkiye, 18 Aralık 2021

Comparison of siRNA Loading Quantification between Spherical and Serrated Gold NanoparticlesComparison of siRNA Loading Quantification between Spherical and Serrated Gold Nanoparticles

Kutlu A. Ü., TUNÇ C. Ü., AYDIN Ö.

European Biotechnology Congress, Bulgaristan, 23 Eylül 2021

Delivery of Naproxen thiosemicarbazide/1,2,4-triazole Derived Chemotherapy Drugs Using Gold Nanoparticles

TUNÇ C. Ü., Kurşunluoğlu G., ATALAY DÜNDAR P., HAN M. İ., AYDIN Ö.

INTERNATIONAL CONFERENCE ON APPLIED ENGINEERING AND NATURAL SCIENCES, Türkiye, 1 - 03 Kasım 2021

Detection of colistin resistant Klebsiella pneumoniae bacteria using surfaceenhanced Raman spectroscopy combined with machine learning

UYSAL F., Hora M., GÜNDOĞDU A., TOKMAKÇI M., AYDIN Ö.

BIO Türkiye Organizasyonu Uluslararası Biyoteknoloji Kongresi, Türkiye, 9 - 11 Eylül 2021

Investigation of Mammalian Cells Expressing SARS-CoV-2 Proteins by Surface-Enhanced Raman Scattering

AKDENİZ M., AYDIN Ö.

BIO Türkiye - International Biotechnology Congress, Türkiye, 09 Eylül 2021 Sürdürülebilir Kalkınma

Surface enhanced Raman Spectroscopy Applications in Biomedical Engineering

AYDIN Ö.

International Materials Science and Nanotechology for Next Generation Conference (MSNG 2021), Elazığ, Türkiye, 14 Temmuz 2021

Development of Gold Nanoparticle Templated Nucleic Acid Assembly for Gene and Drug Delivery

TUNÇ C. Ü., AYDIN Ö.

International Materials Science and Nanotechology for Next Generation Conference (MSNG 2021), Elazığ, Türkiye, 14 Temmuz 2021

Microbial Identification with a New Perspective: Surface-Enhanced Raman Spectroscopy with Machine Learning Techniques

UYSAL F., Sarıdağ A. M., KILIÇ İ. H., TOKMAKÇI M., KAHRAMAN M., AYDIN Ö.

2nd International Conference on Access to Recent Advances in Engineering and Digitalization, Kayseri, Türkiye, 10 Mart 2021

Triple-combination therapy against cisplatin-resistant ovarian cancer cells

Kip B., Aydın Ö.

International Congress on Biological and Health Sciences, Afyonkarahisar, Türkiye, 26 - 28 Şubat 2021, ss.169

Investigation of Mammalian Cells Expressing SARS-CoV-2 Proteins by Surface-Enhanced Raman Scattering (SERS)

Akdeniz M., Uysal Çiloğlu F., Tunc C. U., Atalay Dündar P., Aydın Ö.

International Congress on Biological and Health Sciences, Afyonkarahisar, Türkiye, 26 - 28 Şubat 2021, ss.168 Sürdürülebilir Kalkınma

Cryptosporidium parvum Ookistlerinin Yüzeyde Zenginleştirilmiş Raman Saçılması (SERS) ile İncelenmesi

Arslan A. H., Uysal Çiloğlu F., Yılmaz Ü. G., Şimşek E., Aydın Ö.

V. Yaşam Bilimleri Kongresi, Kayseri, Türkiye, 21 - 22 Şubat 2020, ss.33

Antibiyotik Dirençli ve Duyarlı Staphylococcus aureus Suşlarının Yüzeyde Zenginleştirilmiş Raman Spektroskopisi ve Temel Bileşen Analizi ile Hızlı Tespiti

Uysal Çiloğlu F., Tokmakçı M., Kahraman M., Kılıç İ. H., Aydın Ö.

V. Yaşam Bilimleri Kongresi, Kayseri, Türkiye, 21 - 22 Şubat 2020, ss.21-22

Kitap & Kitap Bölümleri

Determination of Optimum Ratio of Cationic Polymers and Small Interfering RNA with Agarose Gel Retardation Assay

AYDIN Ö., Yılmaz Ü., KANARYA D., TUNÇ C. Ü.

Antisense RNA Design, Delivery, and Analysis. Methods in Molecular Biology, vol 2434, Arechavala-Gomeza V; Garanto Alex, Editör, Humana, New York, NY Springer Nature, New York, ss.117-128, 2022

Ansiklopedide Bölümler

Encyclopedia of Nanoscience and Nanotechnology,

ÇULHA M., KAHRAMAN M., KARATAŞ Ö. F., AYDIN Ö.

American Scientific Publishers, ss., 2009

Metrikler

Yayın

Atıf (WoS)

503

H-İndeks (WoS)

Atıf (Scopus)

638

H-İndeks (Scopus)

Proje

Tez Danışmanlığı

Açık Erişim

BM Sürdürülebilir Kalkınma Amaçları

Yayınlar & Eserler

SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

Diğer Dergilerde Yayınlanan Makaleler

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

Kitap & Kitap Bölümleri

Ansiklopedide Bölümler

Metrikler

Yayın

Atıf (WoS)

H-İndeks (WoS)

Atıf (Scopus)

H-İndeks (Scopus)

Proje

Tez Danışmanlığı

Açık Erişim