Yayınlar & Eserler

Yayın Ağı

SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

A robust deep learning model for the classification of dental implant brands

LEBLEBİCİOĞLU KURTULUŞ İ., Lubbad M., Yilmaz O. M. D., KILIÇ K., KARABOĞA D., BAŞTÜRK A., et al.
Journal of Stomatology, Oral and Maxillofacial Surgery , cilt.125, sa.5, 2024 (SCI-Expanded) identifier identifier

Comparing microbial communities in mucilage and seawater samples: Metagenomic insights into mucilage formation in the Marmara Sea

Gündoğdu A., Nalbantoğlu Ö. U., Karis G., Sarikaya I., Erdogan M. N., Hora M., et al.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH , ss.1-12, 2024 (SCI-Expanded)

The comprehensive evaluation of oral and fecal microbiota in patients with acromegaly

ŞAHİN S., GÜNDOĞDU A., NALBANTOĞLU Ö. U., ÖZDAMAR KARACA Z. C., HACIOĞLU A., URHAN M. E., et al.
PITUITARY , 2024 (SCI-Expanded) identifier

A Shotgun Metagenomics Investigation into Labeling Inaccuracies in Widely Sold Probiotic Supplements in the USA

GÜNDOĞDU A., Karis G., Killpartrick A., ULU KILIÇ A., NALBANTOĞLU Ö. U.
Molecular Nutrition and Food Research , cilt.68, sa.12, 2024 (SCI-Expanded) identifier identifier identifier

A Multicenter Randomized Controlled Trial Of Microbiome-Based Artifıcial Intelligence-Assisted Personalized Diet Vs Low Fodmap Diet: A Novel Approach for the Management of Irritable Bowel Syndrome

Tunalı V., Arslan N. Ç., Ermiş B. H., Derviş Hakim G., Gündoğdu A., Hora M., et al.
AMERICAN JOURNAL OF GASTROENTEROLOGY , ss.1-31, 2024 (SCI-Expanded)

DeepGum: Deep feature transfer for gut microbiome analysis using bottleneck models

Çiftcioğlu U. G. E., Nalbanoglu Ö. U.
BIOMEDICAL SIGNAL PROCESSING AND CONTROL , cilt.91, 2024 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

A Comparative Analysis of Deep Learning-Based Approaches for Classifying Dental Implants Decision Support System

Lubbad M. A. H., LEBLEBİCİOĞLU KURTULUŞ İ., KARABOĞA D., KILIÇ K., BAŞTÜRK A., AKAY B., et al.
JOURNAL OF IMAGING INFORMATICS IN MEDICINE , 2024 (SCI-Expanded) identifier identifier

Machine learning applications in detection and diagnosis of urology cancers: a systematic literature review

Lubbad M., KARABOĞA D., BAŞTÜRK A., AKAY B., Nalbantoglu U., Pacal I.
NEURAL COMPUTING & APPLICATIONS , cilt.36, sa.12, ss.6355-6379, 2024 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

A self-supervised learning model based on variational autoencoder for limited-sample mammogram classification

KARAGÖZ M. A., NALBANTOĞLU Ö. U.
Applied Intelligence , cilt.54, sa.4, ss.3448-3463, 2024 (SCI-Expanded) identifier identifier

Response to Dahly and Morris

Tunali V., Ermiş B. H., NALBANTOĞLU Ö. U.
American Journal of Gastroenterology , 2024 (SCI-Expanded) identifier identifier

Metaproteogenomic analysis of saliva samples from Parkinson’s disease patients with cognitive impairment

ARIKAN M., Demir T. K., Yıldız Z., NALBANTOĞLU Ö. U., Korkmaz N. D., YILMAZ N. C., et al.
npj Biofilms and Microbiomes , cilt.9, sa.1, 2023 (SCI-Expanded) Creative Commons License identifier identifier identifier

A comparative study of YOLO models and a transformer-based YOLOv5 model for mass detection in mammograms

COŞKUN D., KARABOĞA D., BAŞTÜRK A., AKAY B., NALBANTOĞLU Ö. U., DOĞAN S., et al.
Turkish Journal of Electrical Engineering and Computer Sciences , cilt.31, sa.7, ss.1294-1313, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

The role of the Mediterranean diet in modulating the gut microbiome: A review of current evidence

GÜNDOĞDU A., NALBANTOĞLU Ö. U.
Nutrition , cilt.114, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Robust real-time polyp detection system design based on YOLO algorithms by optimizing activation functions and hyper-parameters with artificial bee colony (ABC)

Karaman A., Pacal I., BAŞTÜRK A., AKAY B., Nalbantoglu U., Coskun S., et al.
EXPERT SYSTEMS WITH APPLICATIONS , cilt.221, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Culture-independent assessment of probiotic supplement consistency in commercially available probiotic supplements

GÜNDOĞDU A., NALBANTOĞLU Ö. U., Sarikaya I., Karis G., Erdogan M. N., Hora M., et al.
Food Bioscience , cilt.53, 2023 (SCI-Expanded) identifier identifier

Hyper-parameter optimization of deep learning architectures using artificial bee colony (ABC) algorithm for high performance real-time automatic colorectal cancer (CRC) polyp detection

Karaman A., KARABOĞA D., Pacal I., AKAY B., BAŞTÜRK A., Nalbantoglu U., et al.
APPLIED INTELLIGENCE , cilt.53, sa.12, ss.15603-15620, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

Potential associations between alterations in gut microbiome and obesity-related traits after the bariatric surgery

ÖZDEMİR A., Yozgat A., Isgin-Atici K., Avci E., Yildiz B. D., GÜNDOĞDU A., et al.
JOURNAL OF HUMAN NUTRITION AND DIETETICS , cilt.36, sa.3, ss.981-996, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

An unsupervised transfer learning model based on convolutional auto encoder for non-alcoholic steatohepatitis activity scoring and fibrosis staging of liver histopathological images

KARAGÖZ M. A., AKAY B., BAŞTÜRK A., KARABOĞA D., NALBANTOĞLU Ö. U.
Neural Computing and Applications , cilt.35, sa.14, ss.10605-10619, 2023 (SCI-Expanded) identifier identifier

Artificial intelligence-based personalized diet: A pilot clinical study for irritable bowel syndrome

Karakan T., Gündoğdu A., Alagözlü H., Ekmen N., Özgül S., Tunalı V., et al.
GUT MICROBES , cilt.14, sa.1, ss.1-13, 2022 (SCI-Expanded)

Efficacy of AI-Assisted Personalized Microbiome Modulation by Diet in Functional Constipation: A Randomized Controlled Trial

Arslan N. Ç., GÜNDOĞDU A., Tunali V., Topgül O. H., Beyazgül D., NALBANTOĞLU Ö. U.
Journal of Clinical Medicine , cilt.11, sa.22, 2022 (SCI-Expanded) Creative Commons License identifier identifier identifier

Acromegaly is associated with a distinct oral and gut microbiota

Sahin S., GÜNDOĞDU A., NALBANTOĞLU Ö. U., KADIOĞLU P., ÖZDAMAR KARACA Z. C., HACIOĞLU A., et al.
PITUITARY , cilt.25, sa.3, ss.520-530, 2022 (SCI-Expanded) identifier identifier identifier

Inflammatory bowel disease biomarkers of human gut microbiota selected via different feature selection methods

Bakir-Gungor B., Lar H. H., Jabeer A., NALBANTOĞLU Ö. U., Aran O., Yousef M.
PEERJ , cilt.10, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

A new lightweight convolutional neural network for radiation-induced liver disease classification

Alici-Karaca D., Akay B., Yay A. H., Suna P., Nalbantoğlu Ö. U., Karaboğa D., et al.
BIOMEDICAL SIGNAL PROCESSING AND CONTROL , cilt.73, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier

An efficient real-time colonic polyp detection with YOLO algorithms trained by using negative samples and large datasets

Pacal I., Karaman A., KARABOĞA D., AKAY B., BAŞTÜRK A., Nalbantoglu U., et al.
COMPUTERS IN BIOLOGY AND MEDICINE , cilt.141, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Novel alterations of CC2D1A as a candidate gene in a Turkish sample of patients with autism spectrum disorder

ŞENER E. F., ÖNAL M. G., Dal F., Nalbantoglu U., ÖZKUL Y., CANATAN H., et al.
INTERNATIONAL JOURNAL OF NEUROSCIENCE , cilt.132, sa.11, ss.1072-1079, 2022 (SCI-Expanded) identifier identifier identifier

Stratification of the Gut Microbiota Composition Landscape across the Alzheimer's Disease Continuum in a Turkish Cohort

YILDIRIM S., NALBANTOĞLU Ö. U., Bayraktar A., Ercan F. B., GÜNDOĞDU A., Velioglu H. A., et al.
MSYSTEMS , cilt.7, sa.1, 2022 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Temporal overexpression of IL-22 and Reg3 gamma differentially impacts the severity of experimental autoimmune encephalomyelitis

Eken A., Erdem S., Haliloglu Y., Okus F. Z., Cakir M., Yetkin M. F., et al.
IMMUNOLOGY , cilt.164, sa.1, ss.73-89, 2021 (SCI-Expanded) identifier identifier identifier

Gut microbiota in patients with newly diagnosed acromegaly: a pilot cross-sectional study

HACIOĞLU A., GÜNDOĞDU A., Nalbantoglu U., Karaca Z. C., URHAN M. E., Sahin S., et al.
PITUITARY , cilt.24, sa.4, ss.600-610, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Discovering Potential Taxonomic Biomarkers of Type 2 Diabetes From Human Gut Microbiota via Different Feature Selection Methods

Bakir-Gungor B., Bulut O., Jabeer A., NALBANTOĞLU Ö. U., Yousef M.
FRONTIERS IN MICROBIOLOGY , cilt.12, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

MicroRNA profiling identifies Forkhead box transcription factor M1 (FOXM1) regulated miR-186 and miR-200b alterations in triple negative breast cancer

Hamurcu Z., Sener E. F., Taheri S., Nalbantoglu U., Kokcu N. D., Tahtasakal R., et al.
CELLULAR SIGNALLING , cilt.83, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Taxonomic classification of metagenomic sequences from Relative Abundance Index profiles using deep learning

KARAGÖZ M. A., NALBANTOĞLU Ö. U.
Biomedical Signal Processing and Control , cilt.67, 2021 (SCI-Expanded) identifier identifier

Potential associations between alterations in gut microbiome and obesity-related traits after the bariatric surgery

Özdemir A., Yozgat A., Işgın Atıcı K., Avcı E., Yıldız B. D., Gündoğdu A., et al.
Proceedings Of The Nutrition Society , cilt.80, ss.29-30, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma

Arsenic and selenium measurements in nail and hair show important relationships to Alzheimer's disease in the elderly

KÖSEOĞLU E., KÜTÜK B., NALBANTOĞLU Ö. U., KÖSEOĞLU R., KENDİRCİ M.
JOURNAL OF TRACE ELEMENTS IN MEDICINE AND BIOLOGY , cilt.64, 2021 (SCI-Expanded) identifier identifier identifier

Information Theoretic Metagenome Assembly Allows the Discovery of Disease Biomarkers in Human Microbiome

NALBANTOĞLU Ö. U.
ENTROPY , cilt.23, sa.2, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

A comprehensive review of deep learning in colon cancer

Pacal I., KARABOĞA D., BAŞTÜRK A., AKAY B., Nalbantoglu U.
COMPUTERS IN BIOLOGY AND MEDICINE , cilt.126, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

COVID-19 Pandemic: Group Testing

Nalbantoğlu Ö. U., Gündoğdu A.
FRONTIERS IN MEDICINE , cilt.7, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Group testing performance evaluation for SARS-CoV-2 massive scale screening and testing

NALBANTOĞLU Ö. U.
BMC MEDICAL RESEARCH METHODOLOGY , cilt.20, sa.1, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

FOXM1 plays a role in autophagy by transcriptionally regulating Beclin-1 and LC3 genes in human triple-negative breast cancer cells

Hamurcu Z., Delibaşı N., Nalbantoglu U., Şener E. F., Nurdinov N., Taşçı B., et al.
JOURNAL OF MOLECULAR MEDICINE-JMM , cilt.97, sa.4, ss.491-508, 2019 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

The first report of mobile colistin resistance gene (mcr-1) carrying Escherichia coli in Turkey

KUREKCI C., AYDIN M., NALBANTOĞLU Ö. U., GÜNDOĞDU A.
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE , cilt.16, 2018 (SCI-Expanded)

Human genome-microbiome interaction: metagenomics frontiers for the aetiopathology of autoimmune diseases

GÜNDOĞDU A., Nalbantoglu U.
MICROBIAL GENOMICS , cilt.3, sa.4, 2017 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Reclassification of Wolbachia persica as Francisella persica comb. nov and emended description of the family Francisellaceae

LARSON M. A., Nalbantoglu U., Sayood K., ZENTZ E. B., CER R. Z., Iwen P. C., et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY , cilt.66, ss.1200-1205, 2016 (SCI-Expanded) Creative Commons License identifier identifier identifier

Francisella tularensis Subtype A.II Genomic Plasticity in Comparison with Subtype A.I

LARSON M. A., Nalbantoglu U., Sayood K., ZENTZ E. B., BARTLING A. M., Francesconi S. C., et al.
PLOS ONE , cilt.10, sa.4, 2015 (SCI-Expanded) Creative Commons License identifier identifier identifier

Metagenomic analysis of the microbial community in kefir grains

Nalbantoglu U., Cakar A., Dogan H., Abaci N., Ustek D., Sayood K., et al.
FOOD MICROBIOLOGY , cilt.41, ss.42-51, 2014 (SCI-Expanded) identifier identifier identifier

RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles

Nalbantoglu O. U., Way S. F., Hinrichs S. H., Sayood K.
BMC BIOINFORMATICS , cilt.12, 2011 (SCI-Expanded) Creative Commons License identifier identifier identifier

Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp tularensis A1 and Schu S4

Nalbantoglu U., Sayood K., Dempsey M. P., Iwen P. C., Francesconi S. C., Barabote R. D., et al.
PLOS ONE , cilt.5, sa.2, 2010 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

Data Compression Concepts and Algorithms and Their Applications to Bioinformatics

Nalbantoglu O. U., Russell D. J., Sayood K.
ENTROPY , cilt.12, sa.1, ss.34-52, 2010 (SCI-Expanded) Creative Commons License identifier identifier identifier

Diğer Dergilerde Yayınlanan Makaleler

Geliştirilmiş EfficientNet-B0 mimarisi ile Helikobakter Pilorinin Teşhisi

KARACA D. A., AKAY B., AKAY B., KARABOĞA D., KARABOĞA D., BAŞTÜRK A., et al.
Gazi Üniversitesi Fen Bilimleri Dergisi Part C: Tasarım ve Teknoloji , cilt.12, sa.2, ss.729-742, 2024 (Hakemli Dergi) Creative Commons License identifier

Metagenomic Profiling of Human Protozoan Parasites in Wastewater and Hospital Effluents

GÜNDOĞDU A., Charyyeva A., NALBANTOĞLU Ö. U.
JOURNAL OF CLINICAL PRACTICE AND RESEARCH , sa.5, ss.435-446, 2023 (ESCI) Sürdürülebilir Kalkınma identifier

Humans as a source of colistin resistance: In silico analysis of public metagenomes for the mcr-1 gene in the gut microbiome

GÜNDOĞDU A., NALBANTOĞLU Ö. U.
Erciyes Tip Dergisi , cilt.38, sa.2, ss.59-61, 2016 (ESCI) Creative Commons License identifier identifier

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

An Improved Crow Search Algorithm with Grey Wolf Optimizer for High-Dimensional Optimization Problems

Abudayor A., NALBANTOĞLU Ö. U.
3rd International Conference on Soft Computing and its Engineering Applications, icSoftComp 2021, Anand, Hindistan, 10 - 11 Aralık 2021, cilt.1572 CCIS, ss.51-64 identifier

Identifying Taxonomic Biomarkers of Colorectal Cancer in Human Intestinal Microbiota Using Multiple Feature Selection Methods

Jabeer A., KOÇAK A., AKKAŞ H., Yenisert F., NALBANTOĞLU Ö. U., Yousef M., et al.
2022 Innovations in Intelligent Systems and Applications Conference, ASYU 2022, Antalya, Türkiye, 7 - 09 Eylül 2022 Sürdürülebilir Kalkınma identifier

Developing A Deep Learning Network For Recognition of Dental Implant Systems

Leblebicioğlu Kurtuluş İ., Karaboğa D., Akay B., Baştürk A., Durmaz Yılmaz Ö. M., Kılıç K., et al.
25th Scientific Congress of Turkish Prosthodontics and Implantology Association, Muğla, Türkiye, 4 - 07 Kasım 2021

In silico discovery of antibiotic resistance patterns and artificialintelligence-based decision support systems for rational drug use

ULU KILIÇ A., GÜNDOĞDU A., NALBANTOĞLU Ö. U.
29TH ECCMID, 13 - 16 Nisan 2019

De novo mutations in lipopolysaccharide biosynthesis pathways reveal thecolistin resistance mechanism in Acinetobacter baumannii strains

ULU KILIÇ A., GÜNDOĞDU A., NALBANTOĞLU Ö. U., ASLAN E.
29th ECCMID, 13 - 17 Nisan 2019

Atypical pathobiome of prosthetic joint infections revealed by hybrid approaches of shotgun metagenomics

ULU KILIÇ A., GÜNDOĞDU A., NALBANTOĞLU Ö. U., KAFADAR İ. H., GÜNEY A., KILIÇ H., et al.
29th ECCMID, 13 - 16 Nisan 2019

Patojenlerin Hızlı Tespitinde Gerçek Zamanlı Nanopor Dizileme Teknolojisinin Kullanımı

GÜNDOĞDU A., ULU KILIÇ A., TÜRE YÜCE Z., KILIÇ H., NALBANTOĞLU Ö. U.
7. TÜRKİYE EKMUD BİLİMSEL PLATFORMU, Antalya, Türkiye, 03 Nisan 2019

Machine Learning Analysis of Inflammatory Bowel Disease-Associated Metagenomics Dataset

Hacılar H., NALBANTOĞLU Ö. U., GÜNGÖR B.
2018 3rd International Conference on Computer Science and Engineering (UBMK), 20 - 23 Eylül 2018

Comparison of Gut Microbiota in Patients of Mild-Cognitive Impairment and Alzheimer’s Diseasewith Age and Sex Matched Normal Controls: A Multicenter Study.

NALBANTOĞLU Ö. U., Sezgin B., GÜNDOĞDU A., Koç F., GÖL M. F., Hanoğlu L., et al.
The 7th annual International Human Microbiome Consortium Meeting (IHMC2018), Killarney, İrlanda, 26 - 28 Haziran 2018, ss.165

Gündoğdu A., Kilic H., Ulu Kilic A. , Gündoğan K., Aslan E. , Ufuk N., ”Limited sensitivity andenrichment bias of culture-based pathogen detection in intensive care unit enviroment revealed by metagenomic sequence”, ESCMID Madrid,Spain 21-24 april 2018, Madrid, ISPANYA, 21-24 Nisan 2018, vol.28th, no.28th, pp.116-116 (Link)

GÜNDOĞDU A., ULU KILIÇ A., KILIÇ H., NALBANTOĞLU Ö. U.
.28th ESCMID 2018, Madrid, İspanya, 21 - 24 Nisan 2018

Potential microbial biomarkers of lung cancer

GÜNDOĞDU A., ÖNAL Ö., DEMİR Ö. F., ÖNAL M. G., NALBANTOĞLU Ö. U.
28th European Congress of Clinical Microbiology and Infectious Diseases, 21 - 24 Nisan 2018 Sürdürülebilir Kalkınma

Potential microbial biomarkers of lung cancer .

GÜNDOĞDU A., ÖNAL Ö., DEMİR Ö. F., ÖNAL M. G., NALBANTOĞLU Ö. U.
28th European Congress of Clinical Microbiology and Infectious Diseases, Madrid, İspanya, 21 - 24 Nisan 2018 Sürdürülebilir Kalkınma

Persistence of Microbial Communities in the Hospital Environment

Aslan-Gürpınar E., NALBANTOĞLU Ö. U., KILIÇ H., ULU KILIÇ A., GÜNDOĞAN K., GÜNDOĞDU A.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.44

Towards Microbiome-Based Liquid Biopsy: Oral Microbiota Harbors Highly Accurate Biomarkers of Lung Cancer

GÜNDOĞDU A., NALBANTOĞLU Ö. U., ÖNAL Ö., Önal M. G.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.60-61 Sürdürülebilir Kalkınma

Gut Microbiota Dysbiosis in Substance Use Disorders and Its Partial Recovery by Detoxification Treatment is Revealed by 16S rRNA Gene Deep Sequencing

Kargin M., Celebi E., NALBANTOĞLU Ö. U., GÜNDOĞDU A.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.83

Should Bacterial Etiologies Be Considered in Aseptic Loosening?

GÜNDOĞDU A., NALBANTOĞLU Ö. U., ULU KILIÇ A., KAFADAR I. H., GÜNEY A., KILIÇ H.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.71

Accurate Classification and Biomarker Discovery in Disease Microbiome Using a Novel De Novo Bioinformatics Approach

NALBANTOĞLU Ö. U., Yalçın K., GÜNDOĞDU A.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.63

Microbiome Network Analysis Reveals Highly Symbiotic Interaction of Core Metabolic Pathways

Taylan B., GÜNDOĞDU A., NALBANTOĞLU Ö. U.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.95

General Compositional Trends in Human Gut Microbiome: Diverse Phylogenetic Profiles Converge in Function According to Latent Structure Analysis

Elgun U. G., GÜNDOĞDU A., NALBANTOĞLU Ö. U.
2nd International Human Microbiota: In health and diseases congress, Antalya, Türkiye, 18 - 22 Nisan 2018, ss.62

Whole-genome sequencing reveals recently acquired virulence islands in Ralstonia mannitolilytica isolated from high-risk patients

NALBANTOĞLU Ö. U., KILIÇ H., ULU KILIÇ A., Hora M., GÜNDOĞDU A.
28th European Congress of Clinical Microbiology and Infectious Diseases8th European Congress of Clinical Microbiology and Infectious Diseases, Madrid, İspanya, 21 Nisan 2018, ss.1765

Comparison of antimicrobial resistance-gene diversity in gut microbiome of healthy individuals from Turkey, Europe, America and China

GÜNDOĞDU A., Yalçın K., ULU KILIÇ A., Saka S., NALBANTOĞLU Ö. U.
28th European Congress of Clinical Microbiology and Infectious Diseases8th European Congress of Clinical Microbiology and Infectious Diseases, Madrid, İspanya, 21 Nisan 2018, ss.1512

Mobil Kolistin Direncinin Türkiye Rezistom Ekosistemindeki İlk Sinyalleri: Besin Kaynaklı E. coli Suşlarında mcr-1 Geninin Tespiti

KUREKCI C., AYDIN M., NALBANTOĞLU Ö. U., GÜNDOĞDU A.
13. Antimikrobik Kemoterapi Günleri, İstanbul, Türkiye, 6 - 08 Nisan 2018, ss.88

Oral mikrobiyomdan potansiyel karaciğer kanseri biyobelirteçlerinin Keşfi

Yalçın K., GÜNDOĞDU A., NALBANTOĞLU Ö. U.
3. Yaşam Bilimleri Kongresi, Kayseri, Türkiye, 24 - 25 Şubat 2018, ss.1 Sürdürülebilir Kalkınma

Parkinson Hastalığında Bağırsak Mikrobiyomu Değişikliklerinin in silico incelenmesi

Hora M., Yalçın K., Saka S., NALBANTOĞLU Ö. U., GÜNDOĞDU A.
3. Yaşam Bilimleri Kongresi, Kayseri, Türkiye, 23 - 24 Şubat 2018, ss.1

Nanogözenek DNA dizilemede kullanılan baz çağırma yazılımlarının performans analizi

Saka S., Hora M., Yalçın K., GÜNDOĞDU A., NALBANTOĞLU Ö. U.
3. Yaşam Bilimleri Kongresi, Kayseri, Türkiye, 23 - 24 Şubat 2018, ss.1

Metagenomik Analizler Üzerinden Sağlıklı İnsan Bağırsağındaki Rezistom Çeşitliliğinin Ortaya Çıkarılması

GÜNDOĞDU A., NALBANTOĞLU Ö. U., YALÇIN K.
4. Ulusal Klinik Mikrobiyoloji Kongresİ, Türkiye, 8 - 12 Kasım 2017 Sürdürülebilir Kalkınma

Kültür Bağımlı ve Kültür Bağımsız Yöntemler ile Yoğun Bakım Ünitesi Çevresel Flora Analizi

GÜNDOĞDU A., KILIÇ H., ULU KILIÇ A., Aslan E., NALBANTOĞLU Ö. U.
4. Ulusal Klinik Mikrobiyoloji Kongresi, Türkiye, 8 - 12 Kasım 2017

METAGENOMIK ANALIZLER ÜZERIDEN SAGLIKLI INSAN BAGIRSAGINDAKI REZISTOM ÇESITLILIGININ ORTAYA ÇIKARILMASI

GÜNDOĞDU A., NALBANTOĞLU Ö. U., Yalçın K.
4. Ulusal Klinik Mikrobiyoloji Kongresi, Antalya, Türkiye, 8 - 12 Kasım 2017, ss.208-209

Kültür Bağımlı ve Kültür Bağımsız Yöntemler İle Yoğun Bakım Ünitesi Çevresel Flora Analizi

GÜNDOĞDU A., KILIÇ H., ULU KILIÇ A., Gürpınar E. A., NALBANTOĞLU Ö. U.
4. Ulusal Klinik Mikrobiyoloji Kongresi, Antalya, Türkiye, 8 - 12 Kasım 2017

A phylogeny-free microbiome dysbiosis detection pipeline for non-invasive disease diagnosis

NALBANTOĞLU Ö. U., Onuk A. E.
IEEE International Conference on Electro Information Technology (eit2017), 14 Mayıs 2016 - 17 Mayıs 2017

Hyperthermia and Plasma Membrane Ca ATPase: Isthere any effect of HT on PMCA?

CANER A., NALBANTOĞLU Ö. U.
1. Uluslararası Kanser veİyon Kanalları Kongresi (IONCC2017), 21 - 23 Eylül 2017

Human Protozoan Parasite Diversity In Waste and Treated Water: An Environmental Metagenomics Analysis

GÜNDOĞDU A., CHARYEVA A., KILIÇ H., NALBANTOĞLU Ö. U.
7th Congress of European Microbiologists (FEMS2017), 9 - 13 Temmuz 2017

A NEW COLISTIN RESISTANCE GENE HOMOLOGOUS FOUND IN WASTEWATER METAGENOME

GÜNDOĞDU A., Önal M. G., ULU KILIÇ A., NALBANTOĞLU Ö. U.
The 7th Congress of European Microbiologists (FEMS 2017), Valensiya, İspanya, 9 - 13 Temmuz 2017, ss.1998

HUMAN PROTOZOAN PARASITE DIVERSITY IN WASTE AND TREATED WATER: ANENVIRONMENTAL METAGENOMICS ANALYSIS

GÜNDOĞDU A., Charyyeva A., KILIÇ H., NALBANTOĞLU Ö. U.
The 7th Congress of European Microbiologists (FEMS 2017), 9 - 13 Temmuz 2017

Inferring pathogen transmission networks in Intensive Care Units

NALBANTOĞLU Ö. U.
IEEE International Conference on Electro Information Technology (eit2017), 14 Ocak - 17 Mayıs 2017

Rapid pathogen detection in ambiguous infections using real-time nanopore sequencing technology

GÜNDOĞDU A., KILIÇ H., ULU KILIÇ A., NALBANTOĞLU Ö. U.
27th European Congress of Clinical Microbiology and Infectious Diseases, 22 - 25 Nisan 2017

Rapid pathogen detection in ambiguous infections using real-time nanopore sequencning technology

GÜNDOĞDU A., KILIÇ H., ULU KILIÇ A., NALBANTOĞLU Ö. U.
27th European Congress of Clinical Microbiology and Infectious Diseases, 22 - 25 Nisan 2017

A high resistome diversity in a metropolitan hospital wastewater in Turkey revealed using shotgun metagenomic

GÜNDOĞDU A., NALBANTOĞLU Ö. U., KILIÇ H.
27th European Congress of Clinical Microbiology and Infectious Diseases, 22 - 25 Nisan 2017

A high resistome diversity in a metropolitan hospital wastewater in Turkey revealed using shotgun metagenomics

GÜNDOĞDU A., NALBANTOĞLU Ö. U., KILIÇ H.
27th European Congress of Clinical Microbiology and Infectious Diseases, 22 - 25 Nisan 2017

Plasmids with a potential of pandrug resistance coding found in human gut microbiome

GÜNDOĞDU A., NALBANTOĞLU Ö. U.
The 6th annual International Human Microbiome Consortium Congress, Houston, Amerika Birleşik Devletleri, 8 - 11 Kasım 2016, ss.36

Strain level pathogen detection in metagenomic samples using posterior profile corrections

NALBANTOĞLU Ö. U., GÜNDOĞDU A.
The 6th annual International Human Microbiome Consortium Congress, Houston, Amerika Birleşik Devletleri, 8 - 11 Kasım 2016, ss.41

Rare Members of the Microbiome as Contributors to Dysbiosis

NALBANTOĞLU Ö. U.
THE 6TH INTERNATIONAL HUMAN MICROBIOME CONSORTIUM CONGRESS, 8 - 11 Kasım 2016

Human as a source of colistin resistance: presence of the mcr-1 gene in the gut microbiome

GÜNDOĞDU A., NALBANTOĞLU Ö. U.
26th European Congress of Clinical Microbiology and Infectious Diseases, Amsterdam, Hollanda, 9 - 12 Nisan 2016

Characterization of Protein Sequences Using Latent Semantic Analysis

NALBANTOĞLU Ö. U., Sayood K., Garrity G.
9th International Symposium on Health Informatics and Bioinformatics HIBIT 2015, 16 - 17 Ekim 2015

Compression of Next Generation Sequencing Data

NALBANTOĞLU Ö. U., Riffle A., Sayood K.
2015 Data Compression Conference, Snowbird, UT, USA, 7 - 09 Nisan 2015

Compression of Quality Factors in Next Generation Sequencing

NALBANTOĞLU Ö. U., Sayood K.
2014 Data Compression Conference, Snowbird, UT, USA, 26 - 28 Mart 2014

Kitap & Kitap Bölümleri

Mikrobiyota, Probiyotikler ve Akılcı Beslenme

NALBANTOĞLU Ö. U., GÜNDOĞDU A.
Mikrobiyota, Probiyotikler ve Akılcı Beslenme, Mikrobiyota, Probiyotikler ve Akılcı Beslenme, Editör, Nobel Akademik Yayıncılık, ss.93-190, 2020

Data Compression

NALBANTOĞLU Ö. U., Sayood K.
Computing Handbook, Third Edition: Computer Science and Software Engineering, Teofilo Gonzales, Jorge Diaz-Herrera, Allen Tucker, Editör, Chapman And Hall/Crc, Boca Raton, ss.48-1, 2014

Dynamic programming

NALBANTOĞLU Ö. U.
Multiple Sequence Alignment Methods, David J. Russell, Editör, Springer, London/Berlin , New York, ss.3-27, 2013

Computational Genomic Signatures

NALBANTOĞLU Ö. U., Sayood K.
Morgan & Claypool Publishers, N/A, 2011

Metrikler

Yayın

103

Atıf (WoS)

672

H-İndeks (WoS)

13

Atıf (Scopus)

822

H-İndeks (Scopus)

14

Atıf (Scholar)

119

H-İndeks (Scholar)

4

Atıf (TrDizin)

1

H-İndeks (TrDizin)

1

Proje

20

Fikri Mülkiyet

3

Tez Danışmanlığı

1

Açık Erişim

9
BM Sürdürülebilir Kalkınma Amaçları