Association and expression analysis of porcine HNF1A gene related to meat and carcass quality traits


Kayan A., Uddin M. J., Kocamis H., Tesfaye D., Looft C., Tholen E., ...Daha Fazla

MEAT SCIENCE, cilt.94, sa.4, ss.474-479, 2013 (SCI-Expanded) identifier identifier identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 94 Sayı: 4
  • Basım Tarihi: 2013
  • Doi Numarası: 10.1016/j.meatsci.2013.04.015
  • Dergi Adı: MEAT SCIENCE
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus
  • Sayfa Sayıları: ss.474-479
  • Anahtar Kelimeler: HNF1A, Single nucleotide polymorphism, mRNA and protein expression, Methylation, Meat quality, Pig, INTRAMUSCULAR FAT-CONTENT, DNA METHYLATION, ACID-COMPOSITION, SKELETAL-MUSCLE, QTL, IDENTIFICATION, PIG, POPULATION, MOUSE, HEPATOCYTE-NUCLEAR-FACTOR-1-ALPHA
  • Erciyes Üniversitesi Adresli: Evet

Özet

The aim of this study was to investigate the association and expression of HNF1A gene as a candidate gene for meat and carcass quality traits in pigs. Statistical analysis revealed that the g.8260 A>G polymorphism significantly associated with pH 24(H), meat percentage and muscle area in the F-2 Duroc x Pietrain (DuPi, n = 313) and with pH 24(L), fat area and backfat thickness in the Pietrain (Pi, n = 110) population. HNF1A mRNA and protein expressions were higher (p < 0.05) in animals with the low post-mortem muscle pH 24(L). The promoter methylation profiling suggested that methylation was not involved on HNF1A expression regulation (p > 0.05) in animal with divergent muscle pH. In conclusion, polymorphism in porcine HNF1A gene could be used as a candidate marker to improve the meat and carcass quality traits, with the consideration of breed-specific effect. (C) 2013 Elsevier Ltd. All rights reserved.
The aim of this study was to investigate the association and expression of HNF1A gene as a candidate gene for meat and carcass quality traits in pigs. Statistical analysis revealed that the g.8260 A>G polymorphism significantly associated with pH24H, meat percentage and muscle area in the F2 Duroc × Pietrain (DuPi, n=313) and with pH24L, fat area and backfat thickness in the Pietrain (Pi, n=110) population. HNF1A mRNA and protein expressions were higher (p < 0.05) in animals with the low post-mortem muscle pH24L. The promoter methylation profiling suggested that methylation was not involved on HNF1A expression regulation (p > 0.05) in animal with divergent muscle pH. In conclusion, polymorphism in porcine HNF1A gene could be used as a candidate marker to improve the meat and carcass quality traits, with the consideration of breed-specific effect.